Covid-19 subvarian Omicron BA.4 dan BA.5 telah terdeteksi di Indonesia. Awalnya, merujuk data Kementerian Kesehatan atau Kemenkes, ada 4 kasus Omicron BA.4 dan BA.5 pertama yang dilaporkan di Indonesia pada 6 Juni 2022. Kemudian hingga Senin 13 Juni 2022, jumlah pasien terinfeksi subvarian Omicron bertambah menjadi 8 kasus.
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